Publications

2020

Wolf Phase Tomography (WPT) of Transparent structures using partially Coherent Illumination; Light: Science & Applications 9:142 (2020)
Reproductive Outcomes Predicted by Phase Imaging with Computational Specificity of Spermatozoon Ultrastructure, PNAS 117, 31, 18309
Real-time Jones Phase Microscopy for Studying Transparent and Birefringent Specimens; Optics Express, vol. 28, no. 23
Quantitative Phase Imaging of Stromal Prognostic Markers in Pancreatic Ductal Adenocarcinoma; Biomedic Optics Express, Vol. 11, No. 3
Quantifying Myelin content in Brain Tissue using Color Spatial Light Interference Microscopy (CSLIM); PLOS One 15(11): e0241084
Phase Imaging with Computational Specificity (PICS) for Measuring Dry Mass changes in Sub-cellular Compartments; Nature Comm. 11, Article 6256
Network Science Characteristics of Brain-derived Neuronal Cultures Deciphered from Quantitative Phase Imaging data; Scientific Reports, 10, 15078
Morphometric Analysis of Sperm used for IVP by Three Different Separation Methods with Spatial Light Interference Microscopy; Systems Biology in Reproductive Medicine, Volume 66, 1
Matrix Softness-Mediated 3D Zebrafish Hepatocyte Modulates Response to Endocrine Disrupting chemicals; Environ. Sci. Tech. 54, 13797-13806
Label-free Colorectal Cancer Screening using Deep Learning and Spatial Light Interference Microscopy (SLIM); APL Photonics, 10, 1063-5, 004723
Integrative quantitative-phase and airy light-sheet imaging. Nat Sci Rep 10, 20150 (2020)
High-throughput Sperm Assay using Label-free Microscopy: Morphometric Comparison between different Sperm structures of Boar and Stallion Spermatozoa; Animal Reprod Science, 219, 106509
Harmonically Decoupled Gradient Light Interference Microscopy (HD-GLIM); Optics Letters, Vol. 45, No. 6
Harmonic Optical Tomography of Nonlinear Structures; Nature Photonics, 14, 564–569
ER membranes exhibit phase behavior at sites of organelle contact; PNAS, vol. 117, no. 13, Page 7231
Electrothermal Soft Manipulator Enabling Safe Transport and Handling of Thin Cell/tissue Sheets and Bioelectronic Devices; Science Advances 6 (42)
Computational Optical Imaging goes Viral; APL Photonics 5, 030401

2019

Zinc’s Effect on the Differentiation of Porcine Adipose-Derived Stem Cells into Osteoblasts; Journal of Regenerative Medicine, 8, 2
Tissue Spatial Correlation as Cancer Marker; Journal of Biomedical Optics 24(1), 016502
Quantitative Phase Imaging Reveals Matrix Stiffness-Dependent Growth and Migration of Cancer Cells; Scientific Reports volume 9, Article number: 248 (2019)
Quantitative Phase Imaging (QPI) in Neuroscience; IEEE Journal of Selected Topics in Quantum Electronics, vol. 25, 1
Quantitative Histopathology of Stained Tissues using Color Spatial Light Interference Microscopy (CSLIM); Sci Reports, 9, Article number: 14679 (2019)
Phase separation of YAP reorganizes genome topology for long-term YAP target gene expression, Nat Cell Biol. 2019 Dec; 21(12): 1578–1589
Optical Inspection of Nanoscale Structures using a Novel Machine Learning based Synthetic Image Generation Algorithm; Optics Express, Vol. 27, No. 13
Imaging Collagen Properties in the Uterosacral Ligaments of Women with Pelvic Organ Prolapse using Spatial Light Interference Microscopy (SLIM), Optics and Photonics, Frontiers in Physics, 10, Page 3389
Graphene Oxide Substrates with N-Cadherin Stimulates Neuronal Growth and Intracellular Transport; Acta Biomaterialia
Gabor’s Holography at Sea; Science & Applications (2019) 8, 19
EPI-Illumination Gradient Light Interference Microscopy for Imaging Opaque Structures; Nat. Communications, 10, Article number: 4691 (2019)
Engineering Geometrical 3-Dimensional Untethered in Vitro Neural Tissue Mimic; PNAS, 116 (51) Pages 25932-25940
Eliciting the impacts of cellular noise on metabolic trade-offs by quantitative mass imaging. Nat Commun 10, 848 (2019)
Effects of Substrate Patterning on Cellular Spheroid Growth and Dynamics Measured by Gradient Light Interference Microscopy (GLIM); Journal of BioPhotonics, Vol 12, Issue 12
Cell-to-Cell Influence on Growth in Large Populations; Biomedical Optics Express, Vol. 10, No. 9
Bond-Selective Transient Phase Imaging via Sensing of the Infrared Photothermal Effect; Light: Science & Applications (2019) 8, 116
3D‐Printed Hydrogel Composites for Predictive Temporal (4D) Cellular Organizations and Patterned Biogenic Mineralization; Adv. Healthcare Mater. (2018) 1800788

2018

Topography and Refractometry of Sperm Cells using Spatial Light Interference Microscopy; Journal of Biomedical Optics 025003, Vol. 23(2)
SLIM Microscopy Allows for Visualization of DNA-containing Liposomes Designed for Sperm-mediated Gene Transfer in Cattle; Molecular Biology Reports volume 46, pages 695–703 (2019)
Simultaneous Cell Traction and Growth Measurements using Light; J. Biophotonics (2018) e201800182
Self-Coacervation of a Silk-Like Protein and Its Use As an Adhesive for Cellulosic Materials, ACS Macro Lett. 2018, 7, 9, 1120–1125
Real-time Halo Correction in Phase Contrast Imaging; Biomedical Optics Express, Vol. 9, No. 2
Quantitative Phase Imaging in Biomedicine; Nature Photonics, VOL 12, Pages 578–589
Optical Properties of Acute Kidney Injury Measured by Quantitative Phase Imaging; Biomedical Optics Express Vol. 9, No. 3
Optical Excitation and Detection of Neuronal Activity; J. Biophotonics. (2018) e201800269
Magnified Image Spatial Spectrum (MISS) Microscopy for Nanometer and Millisecond Scale Label-free Imaging; Optics Express, Vol. 26, No. 5
Label-free Quantitative Evaluation of Breast Tissue using Spatial Light Interference Microscopy (SLIM); Scientific Reports (2018) 8:6875
Endoscopic Diffraction Phase Microscopy; Optics Letters, Vol. 43, No. 14
Effect of Tissue Staining in Quantitative Phase Imaging; J. Biophotonics (2018) e201700402
Disorder Strength Measured by Quantitative Phase Imaging as Intrinsic Cancer Marker in Fixed Tissue Biopsies; PLOS One, 10.1371
3D Imaging of Live Specimens-Quantitative Phase Imaging with SLIM and GLIM; Imaging & Microscopy, 4.2018

2017

Three-Dimensional Mesostructures as High-temperature Growth Templates, Electronic Cellular Scaffolds, and Self-propelled Microrobots; PNAS, 114 (45) Pages E9455-E9464
Three-dimensional Intracellular Transport in Neuron Bodies and Neurites Investigated by Label-free Dispersion-relation Phase Spectroscopy; ISAC Cytometry Part A (2017)
The Power of Imaging with Phase, not Power; Physics Today, 5 (2017) Pages 35-40
Robust microbial cell segmentation by optical-phase thresholding with minimal processing requirements. Cytometry, 91: 443-449
Refractive Index Variance of Cells and Tissues Measured by Quantitative Phase Imaging; Optics Express 1573 , Vol. 25, No. 2
Quantitative Phase Imaging for Medical Diagnosis; J. Biophotonics 10, no. 2, 177–205 (2017)
Quantitative Assessment of Neural Outgrowth using Spatial Light Interference Microscopy; Journal of Biomedical Optics 22(6), 066015
Quantifying Collagen Fiber Orientation in Breast Cancer using Quantitative Phase Imaging; Journal of Biomedical Optics 046004, Vol. 22(4)
Physical Significance of Backscattering Phase Measurements; Optics Letters, Vol. 42, No. 22
Measurement of Multispectral Scattering Properties in Mouse Brain Tissue; Biomedical Optics Express 1763, Vol. 8, No. 3
Label-free Tissue Scanner for Colorectal Cancer Screening; Journal of Biomedical Optics 066016, Vol. 22(6)
Halo-free Phase Contrast Microscopy; Scientific Reports, 7:44034
Gradient Light Interference Microscopy for 3D Imaging of Unlabeled Specimens; Nature Communications, 8: 210
Geometric Localization of Thermal Fluctuations in Red Blood Cells; PNAS Early Edition, 1613204114
Coupled Circumferential and Axial Tension Driven by Actin and Myosin Influences in Vivo Axon Diameter; Scientific Reports, 7: 14188
Cell Density Modulates Intracellular Mass Transport in Neural Networks; ISAC, Cytometry Part A
Automatic Gleason Grading of Prostate Cancer using Quantitative Phase Imaging and Machine Learning; Journal of Biomedical Optics 036015, Vol. 22(3)
3D-Printed Phema Materials for Topographical and Biochemical Modulation of Dorsal Root Ganglion Cell Response; ACS Appl. Mater. Interfaces (2017) 9, 30318−30328

2014

White-light Diffraction Tomography of Unlabelled Live Cells, Nature Photonics (2014) 350
Spatiotemporal Characterization of a Fibrin Clot Using Quantitative Phase Imaging; PLOS One, Volume 9, Issue 11 , e111381
Quantitative phase imaging with partially coherent illumination; Optics Letters 5511, Vol. 39, No. 19
Quantitative Phase Imaging of Cells in 2-, 3- and 4-D; Optics & Photonics News, 12 (2014)
Quantitative Phase Imaging (QPI): Metrology meets Biology; IEEE Photonics Journal, Breakthroughs in Photonics, Vol. 6, No. 2
Optical Assay of Erythrocyte Function in Banked Blood; Scientific Reports, 4 : 6211
New Technologies for Measuring Single Cell Mass, Lab. Chip, 14, 646-652 (2014)
Nanoscale Topography and Spatial Light Modulator Characterization using Wide-field Quantitative Phase Imaging; Optics Express 3432, Vol. 22, No. 3
Label-free Characterization of Emerging Human Neuronal Networks; Scientific Reports, 4 : 4434
Inverse Scattering Solutions using Low-Coherence Light; Optics Letters, vol. 39, no. 15
In Situ Measurements of the Axial Expansion of Palladium Microdisks during Hydrogen Exposure using Diffraction Phase Microscopy; Optical Materials Express 2559, Vol. 4, No. 12
Highly Sensitive Quantitative Imaging for Monitoring Single Cancer Cell Growth Kinetics and Drug Response; PLOS One, Volume 9, Issue 2, e89000
EPI-Illumination Diffraction Phase Microscopy with White Light; Optics Letters, Vol. 39, No. 21
Effects of Spatial Coherence in Diffraction Phase Microscopy; Optics Express 5134, Vol. 22, No. 5
Dissolution Chemistry and Biocompatibility of Single-Crystalline Silicon Nanomembranes and Associated Materials for Transient Electronics, ACS Nano (2014)
Diffraction Phase Microscopy: Principles and Applications in Materials and Life Sciences; Advances in Optics and Photonics 6, 57–119 (2014)
Diffraction Phase Microscopy: Monitoring Nanoscale Dynamics in Materials Science; Applied Optics Vol. 53, No. 27

2011

Tissue Refractive Index as Marker of Disease, J. Biomed. Opt. 16(11), 2011
Spatial Light Interference Tomography (SLIT), Opt. Exp., 19 (21), 2011
Spatial Light Interference Microscopy (SLIM); Opt. Exp. 19, 1016-1026 (2011)
SIMULTANEOUS OPTICAL MEASUREMENTS OF CELL MOTILITY AND GROWTH, BIOMED. OPT. EXP., 2 (10), 2011
Scattering-Phase Theorem; Opt. Lett. 36, 1215-1217 (2011)
Optical Measurement of Cycle-Dependent Growth; Proc. Natl. Acad. Sci., 108 (32), (2011)
One-Dimensional Deterministic Transport in Neurons Measured by Dispersion-relation Phase Spectroscopy, J. Phys. Cond. Matt., 23, 2011
Off-axis Quantitative Phase Imaging Processing using Cuda: Toward Real-time Applications; Biomed. Opt. Exp., 2 (7), (2011)
Measuring the Scattering Parameters of Tissues from Quantitative Phase Imaging of Thin Slices, Opt. Lett., 36, (2011)
Measurement of the Nonlinear Elasticity of Red Blood Cell Membranes; Phys. Rev., 83, 051925 (2011)
Light Scattering of Human Red Blood Cells During Metabolic Remodeling of the Membrane; J. Biomed. Opt., 16, 011013 (2011)
Laplace Field Microscopy for Label-free Imaging of Dynamic Biological Structures; Optics Letters, Vol. 36, No. 23
Label-free Intracellular Transport Measured by Spatial Light Interference Microscopy; J. Biomed. Opt. 16, 026019 (2011)
Effective Temperature of Red Blood Cell Membrane Fluctuations; Phys. Rev. Lett., 106, (2011)
Effective 3D Viscoelasticity of Red Blood Cells Measured by Diffraction Phase Microscopy; Biomed. Opt. Express 2, 485-490 (2011)
Dispersion-Relation Phase Spectroscopy of Intracellular Transport, Opt. Exp., 19 (21), 2011
Deconvolved Spatial Light Interference Microscopy for Live Cell Imaging, IEEE Trans. Biomed. Eng., 58 (9), 2011
Correlation-Induced Spectral Changes in Tissues, Opt. Lett., 36 (21), 2011
Cell Imaging Beyond the Diffraction Limit using Sparse Deconvolution Spatial Light Interference Microscopy; Biomed. Opt. Exp., 2 (7), (2011)
Born Approximation Model for Light Scattering by Red Blood Cells; Biomed. Opt. Exp., 2, (10), 2011
Blood Testing at the Single Cell Level using Quantitative Phase and Amplitude Microscopy, Biomed. Opt. Exp, 2(12), 2011
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